BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G11LP1|AL427072
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1527 738 0.0
3x_Contig1449 527 e-149
>3x_Contig1527
Length = 8131
Score = 738 bits (364), Expect = 0.0
Identities = 407/424 (95%), Gaps = 3/424 (0%)
Strand = Plus / Minus
Query: 1 cttggcatttgtttggaagatcgattcttctgtctcttcgcccgatttgacgtcttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cttggcatttgtttggaagatcgattcttctgtctcttcgcccgatttgacgtcttgttt 369
Query: 61 cgttaattttactgttggctctcttgattgggctggagtactttcctttttttctgattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgttaattttactgttggctctcttgattgggctggagtactttcctttttttctgattc 309
Query: 121 gactgtttgcttgtsttttgcaacactatctttggaggctacttttgcagctttgaatcc 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gactgtttgcttgtcttttgcaacactatctttggaggctacttttgcagctttgaatcc 249
Query: 181 agcaccaaatgatagaccagatccgaacgagaaacctggttcaaccttgacggtgtcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 248 agcaccaaatgatagaccagatccgaacgagaaacctggttcaaccttgacggtgtcttt 189
Query: 241 atkt-scatctttstcagtggttttagccgca-gtaaaccagcagaaaaagcattggctg 298
|| | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 188 atttcccatctttctcagtggttttagccgcaggtaaaccagcagaaaaagcattggctg 129
Query: 299 ctccaaatggtttagttgccactccaaagccagaracaaaacttgaagattggccaaatg 358
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 128 ctccaaatggtttagttgccactccaaagccagaaacaaaacttgaagattggccaaatg 69
Query: 359 tgaacgatggttttgscacgtctttgkstggtttaggttctgtgttsttcccttctatst 418
|||||||||||||| ||||||||| ||||||||||||||| || |||||||||| |
Sbjct: 68 tgaacgatggtttttccacgtctttttctggtttaggttctgttttc-tcccttctatct 10
Query: 419 ctgc 422
||||
Sbjct: 9 ctgc 6
>3x_Contig1449
Length = 7865
Score = 527 bits (260), Expect = e-149
Identities = 281/294 (95%)
Strand = Plus / Plus
Query: 472 gtrtctkcttcttttgtgaccgctgtttccgttgtctcagcagtttcaatatkkggrggt 531
|| ||| |||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 47 gtatcttcttcttttgttaccgctgtttccgttgtctcagcagtttcaatatttttaggt 106
Query: 532 ctctctacggaattggcctcttcatttgctgtatcaktctctgtgatgaacttatcagts 591
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 107 ctctctacggaattggcctcttcatttgctgtatcattctctgttatgaacttatcagtc 166
Query: 592 tcttctgaaggtkttgcttcatctttatcattgagtttgaccttcttcacaggagtttct 651
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tcttctgaaggttttgcttcatctttatcattgagtttgaccttcttcacaggagtttct 226
Query: 652 gtgctttctaattccgaattcacctcaggaagcgcacgtttattgctatcgtttaaagtt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtgctttctaattccgaattcacctcaggaagcgcacgtttattgctatcgtttaaagtt 286
Query: 712 tctggcattgtgaaaagcaggaacaatatactggrgccttcttgacaatattat 765
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 287 tctggcattgtgaaaagcaggaacaatatactggagccttcttgacaatattat 340
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4357
Number of Sequences: 1807
Number of extensions: 4357
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 2
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)